MolNFT v2 · #154814 · protein
Crystal structure of HddC from Yersinia pseudotuberculosis complexed with GMP-PN
6JQ8: “Crystal structure of HddC from Yersinia pseudotuberculosis complexed with GMP-PN”. X-ray diffraction at 1.546, 2 ligands (GNH, MG). MolNFT v2 #154814 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JQ8
- Type
- protein
- Length
- 225 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.546
- Source
- Yersinia pseudotuberculosis
- UniProt
- Q8GJ95
- Ligands
- GNH, MG
Structure
x-ray diffraction · resolution 1.546 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 225 | — | Q8GJ95 |
Ligands and binding sites
- GNH · Aminophosphonic acid-guanylate ester · ligand · chains A
- MG · Magnesium ion · metal
- CIT · Citric acid · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JQ8 · Crystal structure of hddc from yersinia pseudotuberculosis complexed with gmp-pn · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GJ95
- Elsewhere: RCSB PDB 6JQ8 · PDBe 6JQ8 · UniProt Q8GJ95
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