MolNFT v2 · #154731 · protein
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
6JNC: “Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus”. Electron microscopy at 3.7. MolNFT v2 #154731 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JNC
- Type
- protein
- Length
- 419 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.7
- Source
- Thermococcus profundus
- UniProt
- O74024
Structure
electron microscopy · resolution 3.7 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 419 | — | O74024 |
Ligands and binding sites
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JNC · Cryo-EM structure of glutamate dehydrogenase from thermococcus profundus · the same entry in another collection · chain A against A, TM-score 1.00
- O74024 · AlphaFold monomer V2.0 prediction for glutamate dehydrogenase (O74024) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O74024
- Elsewhere: RCSB PDB 6JNC · PDBe 6JNC · UniProt O74024
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