MolNFT v2 · #154412 · protein
Crystal structure of N-acetyl mannosmaine kinase with AMP-PNP from Pasteurella multocida
6JDO: “Crystal structure of N-acetyl mannosmaine kinase with AMP-PNP from Pasteurella multocida”. X-ray diffraction at 2.002, 2 ligands (ANP, CA). MolNFT v2 #154412 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JDO
- Type
- protein
- Length
- 584 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.002
- Source
- Pasteurella multocida
- UniProt
- A0A2K0XYW4
- Ligands
- ANP, CA
Structure
x-ray diffraction · resolution 2.002 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 293 | — | A0A2K0XYW4 |
| B | — | protein | 291 | — | A0A2K0XYW4 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JDO · Crystal structure of N-acetyl mannosmaine kinase with AMP-pnp from pasteurella multocida · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2K0XYW4
- Elsewhere: RCSB PDB 6JDO · PDBe 6JDO · UniProt A0A2K0XYW4
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