MolNFT v2 · #154410 · protein
Crystal structure of Baeyer-Villiger monooxygenase from Parvibaculum lavamentivorans
6JDK: “Crystal structure of Baeyer-Villiger monooxygenase from Parvibaculum lavamentivorans”. X-ray diffraction at 2.495, 2 ligands (FAD, MG). MolNFT v2 #154410 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JDK
- Type
- protein
- Length
- 1,030 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.495
- Source
- Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
- UniProt
- A7HU16
- Ligands
- FAD, MG
Structure
x-ray diffraction · resolution 2.495 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 514 | — | A7HU16 |
| B | — | protein | 516 | — | A7HU16 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JDK · Crystal structure of baeyer-villiger monooxygenase from parvibaculum lavamentivorans · the same entry in another collection · chain A against A, TM-score 1.00
- A7HU16 · AlphaFold monomer V2.0 prediction for baeyer-villiger monooxygenase (A7HU16) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7HU16
- Elsewhere: RCSB PDB 6JDK · PDBe 6JDK · UniProt A7HU16
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