MolNFT v2 · #154335 · protein
Phosphotransferase related to CoA biosynthesis pathway
6JBC: “Phosphotransferase related to CoA biosynthesis pathway”. X-ray diffraction at 2.7, 3 ligands (PPV, CA, NA). MolNFT v2 #154335 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JBC
- Type
- protein
- Length
- 295 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.7
- Source
- Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
- UniProt
- Q5JHF1
- Ligands
- PPV, CA, NA
Structure
x-ray diffraction · resolution 2.7 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 295 | — | Q5JHF1 |
Ligands and binding sites
- PPV · Pyrophosphate · ligand · chains A
- CA · Calcium ion · metal · 3 copies · chains A
- NA · Sodium ion · metal · 2 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
- PG4 · Tetraethylene glycol · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JBC · Phosphotransferase related to CoA biosynthesis pathway · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JHF1
- Elsewhere: RCSB PDB 6JBC · PDBe 6JBC · UniProt Q5JHF1
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