MolNFT v2 · #154324 · protein
Structure of pancreatic ATP-sensitive potassium channel bound with repaglinide and ATPgammaS at 3.3A resolution
6JB1: “Structure of pancreatic ATP-sensitive potassium channel bound with repaglinide and ATPgammaS at 3.3A…”. Electron microscopy at 3.3, 5 ligands (POV, PTY, AGS). MolNFT v2 #154324 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6JB1
- Type
- protein
- Length
- 6,772 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.3
- Source
- Mesocricetus auratus; Mus musculus
- UniProt
- Q61743, A0A1U7R319
- Ligands
- POV, PTY, AGS, AJP, BJX
Structure
electron microscopy · resolution 3.3 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | — | protein | 327 | — | Q61743 |
| B, D, F, H | — | protein | 1366 | — | A0A1U7R319 |
Ligands and binding sites
- POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate · ligand · 36 copies · chains A, B, C, D, E, F, G, H
- PTY · Phosphatidylethanolamine · ligand · 16 copies · chains B, D, F, H
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 8 copies · chains A, B, G, C, D, E, F, H
- AJP · Digitonin · ligand · 4 copies · chains B, D, F, H
- BJX · Repaglinide · ligand · 4 copies · chains B, D, F, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JB1 · Structure of pancreatic ATP-sensitive potassium channel bound with repaglinide and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q61743
- Every structure of UniProt A0A1U7R319
- Elsewhere: RCSB PDB 6JB1 · PDBe 6JB1 · UniProt Q61743 · UniProt A0A1U7R319
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