MolNFT v2 · #153666 · protein

Binary Complex of Human DNA Polymerase Mu with MndCTP

6IPI: “Binary Complex of Human DNA Polymerase Mu with MndCTP”. X-ray diffraction at 1.8, 3 ligands (DCP, MN, SO4). MolNFT v2 #153666 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6IPI
Type: protein
Length: 333 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.8
Source: Homo sapiens
UniProt: Q9NP87
Ligands: DCP, MN, SO4

Structure

x-ray diffraction · resolution 1.8 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	333	—	Q9NP87

Ligands and binding sites

DCP · 2'-deoxycytidine-5'-triphosphate · ligand · chains A
MN · Manganese (II) ion · metal · 2 copies · chains A
SO4 · Sulfate ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IPI · Binary complex of human DNA polymerase mu with mndctp · the same entry in another collection · chain A against A, TM-score 1.00
Q9NP87 · AlphaFold monomer V2.0 prediction for DNA-directed DNA/RNA polymerase mu (Q9NP87) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NP87
Elsewhere: RCSB PDB 6IPI · PDBe 6IPI · UniProt Q9NP87

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