MolNFT v2 · #153415 · protein
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-GMP bound form
6IH1: “Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-GMP bound form”. X-ray diffraction at 1.95, 2 ligands (C2E, CA). MolNFT v2 #153415 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6IH1
- Type
- protein
- Length
- 948 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.95
- Source
- Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
- UniProt
- A0A0H3AJ04
- Ligands
- C2E, CA
Structure
x-ray diffraction · resolution 1.95 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 237 | — | A0A0H3AJ04 |
Ligands and binding sites
- C2E · 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar)-3,5,10, 12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3, 2-D:3',2'-J][1,3,7,9,2, 8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) · ligand · 4 copies · chains A, B, C, D
- CA · Calcium ion · metal · 8 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6IH1 · Crystal structure of a standalone versatile eal protein from vibrio cholerae O395… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3AJ04
- Elsewhere: RCSB PDB 6IH1 · PDBe 6IH1 · UniProt A0A0H3AJ04
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