MolNFT v2 · #153212 · protein
The archaeal Methanocaldococcus infernus Elp3 with N-terminus deletion (1-46)
6IAZ · Histone acetyltransferase, ELP3 family: “The archaeal Methanocaldococcus infernus Elp3 with N-terminus deletion (1-46)”. X-ray diffraction at 1.901, 1 ligand (SO4), 2 pockets (best druggability 0.80). MolNFT v2 #153212 on GenesisL1…
- PDB
- 6IAZ
- Type
- protein
- Length
- 426 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.901
- Source
- Methanocaldococcus infernus
- Molecule
- Histone acetyltransferase, ELP3 family
- EC
- 2.3.1.48
- UniProt
- D5VRB9
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.80
Structure
x-ray diffraction · resolution 1.901 · 1 distinct chain · 36% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone acetyltransferase, ELP3 family (EC 2.3.1.48) | protein | 426 | 36% helix, 24% strand | D5VRB9 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1137 | 0.80 | 0.81 | 94 | SO4 |
| 2 | 172 | 0.56 | 0.80 | 27 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6IAZ · The archaeal methanocaldococcus infernus ELP3 with N-terminus deletion (1-46) · the same entry in another collection · chain A against A, TM-score 1.00
- D5VRB9 · AlphaFold monomer V2.0 prediction for tRNA URIDINE(34) acetyltransferase (D5VRB9) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5VRB9
- Elsewhere: RCSB PDB 6IAZ · PDBe 6IAZ · UniProt D5VRB9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.