MolNFT v2 · #152798 · protein + RNA
Crystal structure of DHX8 helicase bound to single stranded poly-adenine RNA
6HYU: “Crystal structure of DHX8 helicase bound to single stranded poly-adenine RNA”. X-ray diffraction at 3.22. MolNFT v2 #152798 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HYU
- Type
- protein + RNA
- Length
- 1,207 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.22
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- Q14562
Structure
x-ray diffraction · resolution 3.22 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 613 | — | Q14562 |
| B | — | rna | 6 | — | — |
| C | — | protein | 585 | — | Q14562 |
| D | — | rna | 3 | — | — |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HYU · Crystal structure of DHX8 helicase bound to single stranded poly- adenine RNA · the same entry in another collection · chain A against A, TM-score 1.00
- Q14562 · AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase DHX8 (Q14562) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14562
- Elsewhere: RCSB PDB 6HYU · PDBe 6HYU · UniProt Q14562
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