MolNFT v2 · #152466 · protein + DNA
ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE in complex with 43 mer DNA
6HP7: “ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE in complex with 43 mer DNA”. X-ray diffraction at 2.2, 1 ligand (PO4). MolNFT v2 #152466 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HP7
- Type
- protein + DNA
- Length
- 858 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.2
- Source
- Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
- UniProt
- O31927
- Ligands
- PO4
Structure
x-ray diffraction · resolution 2.2 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 386 | — | O31927 |
| C | — | dna | 43 | — | — |
| D | — | dna | 43 | — | — |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 6 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HP7 · Arbitrium peptide receptor from spbeta phage in complex with 43 mer DNA · the same entry in another collection · chain A against A, TM-score 1.00
- O31927 · AlphaFold monomer V2.0 prediction for spbeta prophage-derived uncharacterized protein… · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O31927
- Elsewhere: RCSB PDB 6HP7 · PDBe 6HP7 · UniProt O31927
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.