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MolNFT v2 · #152443 · protein

Structure of Beclin1 LIR motif bound to GABARAPL1

6HOI: “Structure of Beclin1 LIR motif bound to GABARAPL1”. X-ray diffraction at 1.14. MolNFT v2 #152443 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6HOI
Type
protein
Length
251 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.14
Source
Homo sapiens; SYNTHETIC CONSTRUCT
UniProt
Q9H0R8, Q14457

Structure

x-ray diffraction · resolution 1.14 · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein118—Q9H0R8
B—protein117—Q9H0R8
F—protein7—Q14457
G—protein9—Q14457

Ligands and binding sites

  • ACT · Acetate ion · additive · 3 copies · chains A, B, F
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6HOI · Structure of BECLIN1 lir motif bound to GABARAPL1 · the same entry in another collection · chain G against G, TM-score 1.00
  • Q9H0R8 · AlphaFold monomer V2.0 prediction for gamma-aminobutyric acid receptor-associated… · a predicted model of the same protein · chain B against A, TM-score 0.96
  • Q14457 · AlphaFold monomer V2.0 prediction for beclin-1 (Q14457) · a predicted model of the same protein · chain F against A, TM-score 0.65

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