MolNFT v2 · #152400 · protein
Structure of BM3 heme domain in complex with troglitazone
6HN8: “Structure of BM3 heme domain in complex with troglitazone”. X-ray diffraction at 1.997, 2 ligands (HEM, TDZ). MolNFT v2 #152400 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HN8
- Type
- protein
- Length
- 905 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.997
- Source
- Bacillus megaterium
- UniProt
- A0A1Q8UP87
- Ligands
- HEM, TDZ
Structure
x-ray diffraction · resolution 1.997 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 453 | — | A0A1Q8UP87 |
| B | — | protein | 452 | — | A0A1Q8UP87 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
- TDZ · (5R)-5-(4-{[(2R)-6-hydroxy-2,5,7,8-tetramethyl-3,4-dihydro-2H-chromen-2-yl]methoxy}benzyl)-1,3-thiazolidine-2,4-dione · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HN8 · Structure of BM3 heme domain in complex with troglitazone · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Q8UP87
- Elsewhere: RCSB PDB 6HN8 · PDBe 6HN8 · UniProt A0A1Q8UP87
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