MolNFT v2 · #152280 · protein

Myxococcus xanthus MglA bound to GDP

6HJO: “Myxococcus xanthus MglA bound to GDP”. X-ray diffraction at 1.98, 1 ligand (GDP). MolNFT v2 #152280 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6HJO
Type: protein
Length: 382 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.98
Source: Myxococcus xanthus DK 1622
UniProt: Q1DB04
Ligands: GDP

Structure

x-ray diffraction · resolution 1.98 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	191	—	Q1DB04

Ligands and binding sites

GDP · Guanosine-5'-diphosphate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6HJO · Myxococcus xanthus mgla bound to GDP · the same entry in another collection · chain A against A, TM-score 1.00
Q1DB04 · AlphaFold monomer V2.0 prediction for mutual gliding-motility protein mgla (Q1DB04) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q1DB04
Elsewhere: RCSB PDB 6HJO · PDBe 6HJO · UniProt Q1DB04

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