MolNFT v2 · #151757 · protein

TarP-3RboP

6H4F: “TarP-3RboP”. X-ray diffraction at 2.18, 3 ligands (FQ8, MG, CL). MolNFT v2 #151757 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6H4F
Type: protein
Length: 3,773 residues
Chains: 12
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.18
Source: Staphylococcus aureus (strain N315)
UniProt: A0A0H3JNB0
Ligands: FQ8, MG, CL

Structure

x-ray diffraction · resolution 2.18 · 9 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B, H	—	protein	318	—	A0A0H3JNB0
C, G, D	—	protein	314	—	A0A0H3JNB0
F	—	protein	315	—	A0A0H3JNB0
O	—	protein	316	—	A0A0H3JNB0
P	—	protein	307	—	A0A0H3JNB0
E	—	protein	317	—	A0A0H3JNB0
Q	—	protein	312	—	A0A0H3JNB0
A	—	protein	317	—	A0A0H3JNB0
I	—	protein	311	—	A0A0H3JNB0

Ligands and binding sites

FQ8 · [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] [(2~{R},3~{R},4~{S})-2,3,4-tris(oxidanyl)-5-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentoxy]phosphoryl]oxy-pentyl] hydrogen phosphate · ligand · 12 copies · chains B, C, F, O, P, E, G, Q, A, D, H, I
MG · Magnesium ion · metal · 4 copies · chains B, C, Q, A, D, H
CL · Chloride ion · ion · 17 copies · chains B, C, F, O, E, G, Q, A, H, D, I
GOL · Glycerol · additive · chains B, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6H4F · TARP-3RBOP · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3JNB0
Elsewhere: RCSB PDB 6H4F · PDBe 6H4F · UniProt A0A0H3JNB0

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.