GL1X · GenesisL1 explorer

MolNFT v1 · #150795 · protein

TARP-3RBOP

6H4F: “TARP-3RBOP”. X-ray diffraction, 3 ligands (FQ8, MG, CL). MolNFT v1 #150795 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6H4F
Type
protein
Length
3,773 residues
Chains
12
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A0A0H3JNB0
Ligands
FQ8, MG, CL

Structure

x-ray diffraction · 9 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B, H—protein318—A0A0H3JNB0
C, G, D—protein314—A0A0H3JNB0
F—protein315—A0A0H3JNB0
O—protein316—A0A0H3JNB0
P—protein307—A0A0H3JNB0
E—protein317—A0A0H3JNB0
Q—protein312—A0A0H3JNB0
A—protein317—A0A0H3JNB0
I—protein311—A0A0H3JNB0

Ligands and binding sites

  • FQ8 · [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] [(2~{R},3~{R},4~{S})-2,3,4-tris(oxidanyl)-5-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentoxy]phosphoryl]oxy-pentyl] hydrogen phosphate · ligand · 12 copies · chains B, C, F, O, P, E, G, Q, A, D, H, I
  • MG · Magnesium ion · metal · 4 copies · chains B, C, Q, A, D, H
  • CL · Chloride ion · ion · 17 copies · chains B, C, F, O, E, G, Q, A, H, D, I
  • GOL · Glycerol · additive · chains B, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6H4F · TarP-3RboP · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

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