MolNFT v2 · #151717 · protein

Crystal structure of the KAP1 RBCC domain in complex with the SMARCAD1 CUE1 domain.

6H3A: “Crystal structure of the KAP1 RBCC domain in complex with the SMARCAD1 CUE1 domain.”. X-ray diffraction at 5.505, 1 ligand (ZN). MolNFT v2 #151717 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6H3A
Type: protein
Length: 644 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 5.505
Source: Homo sapiens
UniProt: Q9H4L7, Q13263
Ligands: ZN

Structure

x-ray diffraction · resolution 5.505 · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
D	—	protein	53	—	Q9H4L7
A	—	protein	266	—	Q13263
B	—	protein	57	—	Q9H4L7
F	—	protein	268	—	Q13263

Ligands and binding sites

ZN · Zinc ion · metal · 8 copies · chains A, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6H3A · Crystal structure of the KAP1 rbcc domain in complex with the SMARCAD1 CUE1 domain. · the same entry in another collection · chain F against F, TM-score 1.00
Q9H4L7 · AlphaFold monomer V2.0 prediction for SWI/SNF-related matrix- associated actin-dependent… · a predicted model of the same protein · chain D against A, TM-score 0.84
Q13263 · AlphaFold monomer V2.0 prediction for transcription intermediary factor 1-beta (Q13263) · a predicted model of the same protein · chain F against A, TM-score 0.81

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9H4L7
Every structure of UniProt Q13263
Elsewhere: RCSB PDB 6H3A · PDBe 6H3A · UniProt Q9H4L7 · UniProt Q13263

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