MolNFT v2 · #151532 · protein
Amylase in complex with acarbose
6GXV: “Amylase in complex with acarbose”. X-ray diffraction at 2.07, 5 ligands (GLC, AC1, BGC). MolNFT v2 #151532 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GXV
- Type
- protein
- Length
- 962 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.07
- Source
- Alicyclobacillus sp.
- UniProt
- A0A3P8MUS3
- Ligands
- GLC, AC1, BGC, CA, NA
Structure
x-ray diffraction · resolution 2.07 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 481 | — | A0A3P8MUS3 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 12 copies · chains A, B
- AC1 · 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose · sugar · 4 copies · chains A, B
- BGC · beta-D-glucopyranose · sugar · 4 copies · chains A, B
- CA · Calcium ion · metal · 6 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GXV · Amylase in complex with acarbose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A3P8MUS3
- Elsewhere: RCSB PDB 6GXV · PDBe 6GXV · UniProt A0A3P8MUS3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.