GL1X · GenesisL1 explorer

MolNFT v2 · #151258 · protein

Cell division regulator GpsB in complex with peptide fragment of L. monocytogenes Penicillin Binding Protein PBPA1

6GPZ: “Cell division regulator GpsB in complex with peptide fragment of L. monocytogenes Penicillin Binding Protein…”. X-ray diffraction at 1.6, 1 ligand (ZN). MolNFT v2 #151258 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6GPZ
Type
protein
Length
128 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.6
Source
Bacillus subtilis subsp. subtilis str. 168; SYNTHETIC CONSTRUCT
UniProt
P0CI74
Ligands
ZN

Structure

x-ray diffraction · resolution 1.6 · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B—protein62—P0CI74
A—protein63—P0CI74
E—protein3——

Ligands and binding sites

  • ZN · Zinc ion · metal · 8 copies · chains B, A
  • IMD · Imidazole · additive · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GPZ · Cell division regulator gpsb in complex with peptide fragment of L. monocytogenes… · the same entry in another collection · chain A against A, TM-score 1.00
  • P0CI74 · AlphaFold monomer V2.0 prediction for cell cycle protein gpsb (P0CI74) · a predicted model of the same protein · chain A against A, TM-score 0.91

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