MolNFT v2 · #151157 · DNA
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group P21/n
6GN3: “Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group P21/n”. X-ray diffraction at 2.8, 3 ligands (TMO, CO, CL). MolNFT v2 #151157 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GN3
- Type
- DNA
- Length
- 36 nucleotides
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.8
- Ligands
- TMO, CO, CL
Structure
x-ray diffraction · resolution 2.8 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | — | dna | 6 | — | — |
Ligands and binding sites
- TMO · trimethylamine oxide · ligand · 4 copies · chains A, B, F
- CO · Cobalt (II) ion · metal · 2 copies · chains B, D
- CL · Chloride ion · ion · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GN3 · Racemic crystal structure of a-DNA duplex formed from D(CCCGGG) in space group P21/N · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6GN3 · PDBe 6GN3
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