MolNFT v2 · #147071 · protein
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, oxidized)
6D9D: “Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open…”. X-ray diffraction at 2.2, 3 ligands (FAD, UD1, NA). MolNFT v2 #147071 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6D9D
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.2
- Source
- Corynebacterium diphtheriae
- UniProt
- A0A246CDW5
- Ligands
- FAD, UD1, NA
Structure
x-ray diffraction · resolution 2.2 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 386 | — | A0A246CDW5 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
- UD1 · Uridine-diphosphate-N-acetylglucosamine · ligand · chains A
- NA · Sodium ion · metal · chains A
- IPA · Isopropyl alcohol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D9D · Crystal structure of corynebacterium diphtheriae udp-galactopyranose mutase in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A246CDW5
- Elsewhere: RCSB PDB 6D9D · PDBe 6D9D · UniProt A0A246CDW5
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