MolNFT v2 · #146585 · protein
Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815
6CV6: “Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815”. X-ray diffraction at 2.6, 1 ligand (CL). MolNFT v2 #146585 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CV6
- Type
- protein
- Length
- 1,737 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.6
- Source
- Paraburkholderia phymatum
- UniProt
- B2JVW0
- Ligands
- CL
Structure
x-ray diffraction · resolution 2.6 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, F, G, H | — | protein | 145 | — | B2JVW0 |
| B, C, E | — | protein | 145 | — | B2JVW0 |
| D, J, K, L | — | protein | 144 | — | B2JVW0 |
| I | — | protein | 146 | — | B2JVW0 |
Ligands and binding sites
- CL · Chloride ion · ion · chains B, G
- TLA · L(+)-tartaric acid · additive · 24 copies · chains A, B, E, C, D, F, G, I, H, J, K, L
- TAR · D(-)-tartaric acid · additive · 12 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CV6 · Crystal structure of 3-dehydroquinate dehydratase, type II, from burkholderia phymatum… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2JVW0
- Elsewhere: RCSB PDB 6CV6 · PDBe 6CV6 · UniProt B2JVW0
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