MolNFT v2 · #141991 · protein + DNA
Crystal structure of TREX1 in complex with a Y structured DNA
5YWS: “Crystal structure of TREX1 in complex with a Y structured DNA”. X-ray diffraction at 2, 1 ligand (MG). MolNFT v2 #141991 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YWS
- Type
- protein + DNA
- Length
- 502 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Mus musculus; SYNTHETIC CONSTRUCT
- UniProt
- Q91XB0
- Ligands
- MG
Structure
x-ray diffraction · resolution 2 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 231 | — | Q91XB0 |
| B | — | protein | 234 | — | Q91XB0 |
| C | — | dna | 17 | — | — |
| D | — | dna | 20 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 4 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YWS · Crystal structure of TREX1 in complex with a Y structured DNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91XB0
- Elsewhere: RCSB PDB 5YWS · PDBe 5YWS · UniProt Q91XB0
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