MolNFT v2 · #140536 · protein
Plasmodium vivax SHMT(C346A) bound with PLP-glycine and GS395
5XMR: “Plasmodium vivax SHMT(C346A) bound with PLP-glycine and GS395”. X-ray diffraction at 2.55, 2 ligands (8AO, CL). MolNFT v2 #140536 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XMR
- Type
- protein
- Length
- 1,329 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.55
- Source
- Plasmodium vivax
- UniProt
- A0A1G4H5I1
- Ligands
- 8AO, CL
Structure
x-ray diffraction · resolution 2.55 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 443 | — | A0A1G4H5I1 |
Ligands and binding sites
- 8AO · (4~{S})-6-azanyl-3-methyl-4-[3-[4-(phenylmethyl) sulfonylphenyl]-5-(trifluoromethyl)phenyl]-4-propan-2-yl-2~{H}-pyrano[2,3-c]pyrazole-5-carbonitrile · ligand · 3 copies · chains A, B, C
- CL · Chloride ion · ion · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5XMR · Plasmodium vivax SHMT(C346A) bound with plp-glycine and GS395 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1G4H5I1
- Elsewhere: RCSB PDB 5XMR · PDBe 5XMR · UniProt A0A1G4H5I1
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