MolNFT v2 · #139881 · protein

Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(3)

5X2A: “Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(3)”. X-ray diffraction at 1.85, 4 ligands (7XO, ANP, MG). MolNFT v2 #139881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5X2A
Type: protein
Length: 1,219 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.85
Source: Homo sapiens
UniProt: P00533
Ligands: 7XO, ANP, MG, CL

Structure

x-ray diffraction · resolution 1.85 · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	297	—	P00533
B	—	protein	322	—	P00533
C	—	protein	303	—	P00533
D	—	protein	297	—	P00533

Ligands and binding sites

7XO · N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-9-propan-2-yl-purine-2,8-diamine · ligand · 3 copies · chains A, B, C
ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 3 copies · chains A, B, D
MG · Magnesium ion · metal · 4 copies · chains A, B, D
CL · Chloride ion · ion · chains A
EDO · 1,2-ethanediol · additive · 12 copies · chains A, D, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5X2A · Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(3) · the same entry in another collection · chain D against D, TM-score 1.00
P00533 · AlphaFold monomer V2.0 prediction for epidermal growth factor receptor (P00533) · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00533
Elsewhere: RCSB PDB 5X2A · PDBe 5X2A · UniProt P00533

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