MolNFT v2 · #137517 · protein + DNA
Original engineered variant of I-OnuI meganuclease targeting the HIV integrase gene; harbors 49 point mutations relative to wild-type I-OnuI
5V0Q: “Original engineered variant of I-OnuI meganuclease targeting the HIV integrase gene; harbors 49 point…”. X-ray diffraction at 2.4, 1 ligand (CA). MolNFT v2 #137517 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5V0Q
- Type
- protein + DNA
- Length
- 343 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.4
- Source
- synthetic construct; SYNTHETIC CONSTRUCT
- Ligands
- CA
Structure
x-ray diffraction · resolution 2.4 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 291 | — | — |
| B | — | dna | 26 | — | — |
| C | — | dna | 26 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5V0Q · Original engineered variant of I-onui meganuclease targeting the HIV integrase gene… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5V0Q · PDBe 5V0Q
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