MolNFT v2 · #136315 · protein
E. coli dihydropteroate synthase complexed with 6-methylamino-5-nitrosoisocytosine
5U0V: “E. coli dihydropteroate synthase complexed with 6-methylamino-5-nitrosoisocytosine”. X-ray diffraction at 1.7, 2 ligands (7VJ, NA). MolNFT v2 #136315 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U0V
- Type
- protein
- Length
- 506 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.7
- Source
- Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
- UniProt
- P0AC14
- Ligands
- 7VJ, NA
Structure
x-ray diffraction · resolution 1.7 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 257 | — | P0AC14 |
| B | — | protein | 249 | — | P0AC14 |
Ligands and binding sites
- 7VJ · 2-amino-6-(methylamino)-5-nitrosopyrimidin-4(3H)-one · ligand · 2 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A, B
- ACY · Acetic acid · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U0V · E. COLI dihydropteroate synthase complexed with 6-methylamino-5- nitrosoisocytosine · the same entry in another collection · chain A against A, TM-score 1.00
- P0AC14 · AlphaFold monomer V2.0 prediction for dihydropteroate synthase (P0AC14) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AC14
- Elsewhere: RCSB PDB 5U0V · PDBe 5U0V · UniProt P0AC14
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