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MolNFT v2 · #136081 · protein

PagF prenyltransferase with Tyr-Tyr-Tyr and DMSPP

5TU5: “PagF prenyltransferase with Tyr-Tyr-Tyr and DMSPP”. X-ray diffraction at 1.9, 2 ligands (DST, MG). MolNFT v2 #136081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5TU5
Type
protein
Length
300 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.9
Source
Planktothrix agardhii NIES-596; SYNTHETIC CONSTRUCT
UniProt
F5B6Z0
Ligands
DST, MG

Structure

x-ray diffraction · resolution 1.9 · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein297—F5B6Z0
B—protein3——

Ligands and binding sites

  • DST · Dimethylallyl S-thiolodiphosphate · ligand · chains A, B
  • MG · Magnesium ion · metal

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5TU5 · Pagf prenyltransferase with tyr-tyr-tyr and dmspp · the same entry in another collection · chain A against A, TM-score 1.00

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