MolNFT v2 · #129989 · protein

Cryo-EM structure of F-actin in complex with ADP-BeFx

5OOF: “Cryo-EM structure of F-actin in complex with ADP-BeFx”. Electron microscopy at 3.4, 2 ligands (ADP, MG). MolNFT v2 #129989 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5OOF
Type: protein
Length: 1,855 residues
Chains: 5
Method: electron microscopy
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 3.4
Source: Oryctolagus cuniculus
UniProt: P68135
Ligands: ADP, MG

Structure

electron microscopy · resolution 3.4 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E	—	protein	371	—	P68135

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · 5 copies · chains A, B, C, D, E
MG · Magnesium ion · metal · 5 copies

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5OOF · Cryo-EM structure of F-actin in complex with ADP-befx · the same entry in another collection · chain E against E, TM-score 1.00
P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain E against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P68135
Elsewhere: RCSB PDB 5OOF · PDBe 5OOF · UniProt P68135

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