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MolNFT v2 · #129982 · protein

Streptomyces PAC13 (H42Q) with uridine

5OO8: “Streptomyces PAC13 (H42Q) with uridine”. X-ray diffraction at 1.78, 1 ligand (URI). MolNFT v2 #129982 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5OO8
Type
protein
Length
120 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.78
Source
Streptomyces coeruleorubidus
UniProt
E2EKP5
Ligands
URI

Structure

x-ray diffraction · resolution 1.78 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein120—E2EKP5

Ligands and binding sites

  • URI · Uridine · ligand · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OO8 · Streptomyces PAC13 (H42Q) with uridine · the same entry in another collection · chain A against A, TM-score 1.00

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