MolNFT v2 · #129613 · protein
Structure of a novel oxidoreductase from Gloeobacter violaceus
5ODE: “Structure of a novel oxidoreductase from Gloeobacter violaceus”. X-ray diffraction at 2.196, 2 ligands (FAD, SO4). MolNFT v2 #129613 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ODE
- Type
- protein
- Length
- 646 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.196
- Source
- Gloeobacter violaceus
- UniProt
- Q7NCP4
- Ligands
- FAD, SO4
Structure
x-ray diffraction · resolution 2.196 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 324 | — | Q7NCP4 |
| B | — | protein | 322 | — | Q7NCP4 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · 4 copies · chains A, B
- SO4 · Sulfate ion · ion · 11 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ODE · Structure of a novel oxidoreductase from gloeobacter violaceus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7NCP4
- Elsewhere: RCSB PDB 5ODE · PDBe 5ODE · UniProt Q7NCP4
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