MolNFT v2 · #127664 · protein
Arabidopsis thaliana IspD Glu258Ala mutant in complex with Azolopyrimidine (1)
5MRO: “Arabidopsis thaliana IspD Glu258Ala mutant in complex with Azolopyrimidine (1)”. X-ray diffraction at 1.8, 3 ligands (Q9P, CD, K). MolNFT v2 #127664 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MRO
- Type
- protein
- Length
- 215 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.8
- Source
- Arabidopsis thaliana
- UniProt
- P69834
- Ligands
- Q9P, CD, K
Structure
x-ray diffraction · resolution 1.8 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 215 | — | P69834 |
Ligands and binding sites
- Q9P · Azolopyrimidine · ligand · chains A
- CD · Cadmium ion · metal · 3 copies · chains A
- K · Potassium ion · metal · chains A
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5MRO · Arabidopsis thaliana ispd GLU258ALA mutant in complex with azolopyrimidine (1) · the same entry in another collection · chain A against A, TM-score 1.00
- P69834 · AlphaFold monomer V2.0 prediction for 2-C-methyl-D-erythritol 4-phosphate… · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69834
- Elsewhere: RCSB PDB 5MRO · PDBe 5MRO · UniProt P69834
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