MolNFT v2 · #126619 · protein
Crystal structure of visfatin in complex with SAR154782-rp.
5LX5: “Crystal structure of visfatin in complex with SAR154782-rp.”. X-ray diffraction at 1.88, 2 ligands (7A0, DPO). MolNFT v2 #126619 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5LX5
- Type
- protein
- Length
- 926 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.88
- Source
- Homo sapiens
- UniProt
- P43490
- Ligands
- 7A0, DPO
Structure
x-ray diffraction · resolution 1.88 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 463 | — | P43490 |
Ligands and binding sites
- 7A0 · [(2~{R},3~{S},4~{R},5~{R})-5-[2-azanyl-5-[[[4-[6-(ethylamino)-5-(2-piperidin-1-ylethylcarbamoyl) pyridin-2-yl]-2-fluoranyl-phenyl]carbamoylamino]methyl]pyridin-1-ium-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate · ligand · 2 copies · chains A, B
- DPO · Diphosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LX5 · Crystal structure of visfatin in complex with SAR154782-rp. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P43490
- Elsewhere: RCSB PDB 5LX5 · PDBe 5LX5 · UniProt P43490
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