GL1X · GenesisL1 explorer

MolNFT v2 · #126075 · protein

Low dose Thaumatin - 360-400 ms.

5LH1 · Thaumatin-1: “Low dose Thaumatin - 360-400 ms.”. X-ray diffraction at 1.9. MolNFT v2 #126075 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5LH1
Type
protein
Length
207 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.9
Source
Thaumatococcus daniellii
Molecule
Thaumatin-1
UniProt
P02883

Structure

x-ray diffraction · resolution 1.9 · 1 distinct chain · 12% helix, 39% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AThaumatin-1protein20712% helix, 39% strandP02883

Ligands and binding sites

  • TLA · L(+)-tartaric acid · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

  • 5LH1 · Low dose thaumatin - 360-400 ms. · the same entry in another collection · chain A against A, TM-score 1.00
  • P02883 · AlphaFold monomer V2.0 prediction for thaumatin I (P02883) · a predicted model of the same protein · chain A against A, TM-score 1.00

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