MolNFT v2 · #125781 · protein
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E62A
5L8B: “Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E62A”. X-ray diffraction at 2.21, 1 ligand (CA). MolNFT v2 #125781 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5L8B
- Type
- protein
- Length
- 2,675 residues
- Chains
- 30
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.21
- Source
- Rhodospirillum rubrum
- UniProt
- Q2RVS1
- Ligands
- CA
Structure
x-ray diffraction · resolution 2.21 · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, M, N | — | protein | 90 | — | Q2RVS1 |
| B, C, D, G, H, L, P, T, c | — | protein | 89 | — | Q2RVS1 |
| E, I, J, Q, R, S, U | — | protein | 91 | — | Q2RVS1 |
| F, K, W, X, Y, Z, a, b | — | protein | 88 | — | Q2RVS1 |
| O | — | protein | 90 | — | Q2RVS1 |
| V | — | protein | 84 | — | Q2RVS1 |
| d | — | protein | 89 | — | Q2RVS1 |
Ligands and binding sites
- CA · Calcium ion · metal · 24 copies · chains A, J, B, C, D, E, F, H, G, I, O, K, T, L, M, N, P, R, Q, S, U, d, V, W, X, Y, Z, b, a, c
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5L8B · Crystal structure of rhodospirillum rubrum RRU_A0973 mutant E62A · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2RVS1
- Elsewhere: RCSB PDB 5L8B · PDBe 5L8B · UniProt Q2RVS1
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