MolNFT v2 · #123951 · protein
Rat Galectin 5 with lactose
5JPG: “Rat Galectin 5 with lactose”. X-ray diffraction at 1.9, 3 ligands (GLC, GAL, NA). MolNFT v2 #123951 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5JPG
- Type
- protein
- Length
- 279 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Rattus norvegicus
- UniProt
- P47967
- Ligands
- GLC, GAL, NA
Structure
x-ray diffraction · resolution 1.9 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 144 | — | P47967 |
| B | — | protein | 135 | — | P47967 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A, B
- GAL · beta-D-galactopyranose · sugar · 2 copies · chains A, B
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5JPG · Rat galectin 5 with lactose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47967
- Elsewhere: RCSB PDB 5JPG · PDBe 5JPG · UniProt P47967
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