MolNFT v2 · #123805 · protein

Crystal structure of human JUNO (crystal form 1)

5JKA: “Crystal structure of human JUNO (crystal form 1)”. X-ray diffraction at 2, 4 ligands (NAG, BMA, MAN). MolNFT v2 #123805 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5JKA
Type: protein
Length: 399 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2
Source: Homo sapiens
UniProt: A6ND01
Ligands: NAG, BMA, MAN, CL

Structure

x-ray diffraction · resolution 2 · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	—	protein	199	—	A6ND01
A	—	protein	200	—	A6ND01

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains B
BMA · beta-D-mannopyranose · sugar
MAN · alpha-D-mannopyranose · sugar
CL · Chloride ion · ion · 3 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5JKA · Crystal structure of human juno (crystal form 1) · the same entry in another collection · chain A against A, TM-score 1.00
A6ND01 · AlphaFold monomer V2.0 prediction for sperm-egg fusion protein juno (A6ND01) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6ND01
Elsewhere: RCSB PDB 5JKA · PDBe 5JKA · UniProt A6ND01

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