MolNFT v2 · #121686 · protein
Crystal structure of M-crystallin in the presence of nickel
5HT9: “Crystal structure of M-crystallin in the presence of nickel”. X-ray diffraction at 1.869, 2 ligands (MG, NI). MolNFT v2 #121686 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HT9
- Type
- protein
- Length
- 168 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.869
- Source
- Methanosarcina acetivorans C2A
- UniProt
- Q8TMX3
- Ligands
- MG, NI
Structure
x-ray diffraction · resolution 1.869 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 84 | — | Q8TMX3 |
Ligands and binding sites
- MG · Magnesium ion · metal · 4 copies · chains A, B
- NI · Nickel (II) ion · metal · 2 copies · chains A, B
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5HT9 · Crystal structure of M-crystallin in the presence of nickel · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TMX3
- Elsewhere: RCSB PDB 5HT9 · PDBe 5HT9 · UniProt Q8TMX3
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