MolNFT v2 · #117712 · protein
Crystal structure of the active catalytic core of the human DEAD-box protein DDX3 bound to AMPPNP
5E7M: “Crystal structure of the active catalytic core of the human DEAD-box protein DDX3 bound to AMPPNP”. X-ray diffraction at 2.304, 1 ligand (ANP). MolNFT v2 #117712 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5E7M
- Type
- protein
- Length
- 424 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.304
- Source
- Homo sapiens
- UniProt
- O00571
- Ligands
- ANP
Structure
x-ray diffraction · resolution 2.304 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 424 | — | O00571 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5E7M · Crystal structure of the active catalytic core of the human dead-box protein DDX3 bound… · the same entry in another collection · chain A against A, TM-score 1.00
- O00571 · AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase DDX3X (O00571) · a predicted model of the same protein · chain A against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00571
- Elsewhere: RCSB PDB 5E7M · PDBe 5E7M · UniProt O00571
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