MolNFT v2 · #117024 · protein
Crystal Structure of IAg7 in complex with RLGL-WE14
5DMK: “Crystal Structure of IAg7 in complex with RLGL-WE14”. X-ray diffraction at 2.45. MolNFT v2 #117024 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DMK
- Type
- protein
- Length
- 1,445 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.45
- Source
- Mus musculus
- UniProt
- P04228, Q31135
Structure
x-ray diffraction · resolution 2.45 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 171 | — | P04228 |
| B, F | — | protein | 190 | — | Q31135 |
| C, E, G | — | protein | 173 | — | P04228 |
| D | — | protein | 186 | — | Q31135 |
| H | — | protein | 189 | — | Q31135 |
Ligands and binding sites
- FLC · Citrate anion · additive · 2 copies · chains B, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DMK · Crystal structure of IAG7 in complex with rlgl-WE14 · the same entry in another collection · chain H against H, TM-score 1.00
- P04228 · AlphaFold monomer V2.0 prediction for H-2 class II histocompatibility antigen, a-D alpha… · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04228
- Every structure of UniProt Q31135
- Elsewhere: RCSB PDB 5DMK · PDBe 5DMK · UniProt P04228 · UniProt Q31135
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