MolNFT v2 · #116981 · protein
Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
5DL9: “Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students”. X-ray diffraction at 1.38, 1 ligand (IOD). MolNFT v2 #116981 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DL9
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.38
- Source
- Gallus gallus
- UniProt
- P00698
- Ligands
- IOD
Structure
x-ray diffraction · resolution 1.38 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 129 | — | P00698 |
Ligands and binding sites
- IOD · Iodide ion · ion · 4 copies · chains A
- EDO · 1,2-ethanediol · additive · 9 copies · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DL9 · Structure of tetragonal lysozyme in complex with iodine solved by uwo students · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00698
- Elsewhere: RCSB PDB 5DL9 · PDBe 5DL9 · UniProt P00698
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