MolNFT v2 · #116964 · protein
Crystal Structure of Calcium-loaded S100B bound to SBi29
5DKR: “Crystal Structure of Calcium-loaded S100B bound to SBi29”. X-ray diffraction at 1.742, 2 ligands (5CZ, CA). MolNFT v2 #116964 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DKR
- Type
- protein
- Length
- 179 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.742
- Source
- Bos taurus
- UniProt
- P02638
- Ligands
- 5CZ, CA
Structure
x-ray diffraction · resolution 1.742 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 89 | — | P02638 |
| B | — | protein | 90 | — | P02638 |
Ligands and binding sites
- 5CZ · 2-[4-(4-carbamimidoylphenoxy)phenyl]-1H-indole-6-carboximidamide · ligand · chains A, B
- CA · Calcium ion · metal · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DKR · Crystal structure of calcium-loaded S100B bound to SBI29 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02638
- Elsewhere: RCSB PDB 5DKR · PDBe 5DKR · UniProt P02638
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