MolNFT v2 · #116916 · protein

Crystal structure of the zuotin homology domain (ZHD) from yeast Zuo1

5DJE: “Crystal structure of the zuotin homology domain (ZHD) from yeast Zuo1”. X-ray diffraction at 1.85. MolNFT v2 #116916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5DJE
Type: protein
Length: 271 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.85
Source: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt: P32527

Structure

x-ray diffraction · resolution 1.85 · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	135	—	P32527
B	—	protein	136	—	P32527

Ligands and binding sites

PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A, B
BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains B
EDO · 1,2-ethanediol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5DJE · Crystal structure of the zuotin homology domain (zhd) from yeast ZUO1 · the same entry in another collection · chain A against A, TM-score 1.00
P32527 · AlphaFold monomer V2.0 prediction for zuotin (P32527) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P32527
Elsewhere: RCSB PDB 5DJE · PDBe 5DJE · UniProt P32527

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