MolNFT v1 · #99131 · protein
Complex of ovine serum albumin with 3,5-diiodosalicylic acid
4LUH: “Complex of ovine serum albumin with 3,5-diiodosalicylic acid”. X-ray diffraction, 3 ligands (DIU, LMR, 2Q5), 8 pockets (best druggability 0.79). MolNFT v1 #99131 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4LUH
- Type
- protein
- Length
- 583 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Serum albumin
- UniProt
- P14639
- Ligands
- DIU, LMR, 2Q5
- Pockets
- 8 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serum albumin | protein | 583 | 76% helix, 0% strand | P14639 |
Ligands and binding sites
- DIU · 2-hydroxy-3,5-diiodo-benzoic acid · ligand · 2 copies · chains A
- LMR · (2S)-2-hydroxybutanedioic acid · ligand · 2 copies · chains A
- 2Q5 · (2R)-2-{[(2R)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propyl]oxy}propan-1-ol · ligand · 2 copies · chains A
- SIN · Succinic acid · additive · 3 copies · chains A
- ACT · Acetate ion · additive · 3 copies · chains A
- MLI · Malonate ion · additive · 2 copies · chains A
- FMT · Formic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 997 | 0.79 | 0.81 | 70 | SIN, ACT, LMR |
| 2 | 519 | 0.77 | 0.84 | 47 | DIU |
| 3 | 102 | 0.71 | 0.93 | 20 | SIN, FMT |
| 4 | 200 | 0.61 | 0.82 | 21 | 2Q5 |
| 5 | 52 | 0.61 | 0.92 | 15 | ACT |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14639
- Elsewhere: RCSB PDB 4LUH · PDBe 4LUH · UniProt P14639
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