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MolNFT v1 · #99122 · protein

Thermostabilized rebh

4LU6 · Flavin-dependent tryptophan halogenase rebh: “Thermostabilized rebh”. X-ray diffraction, 1 ligand (PO4), 8 pockets (best druggability 0.82). MolNFT v1 #99122 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4LU6
Type
protein
Length
1,054 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Flavin-dependent tryptophan halogenase rebh
EC
1.14.14.7
UniProt
Q8KHZ8
Ligands
PO4
Pockets
8 · best druggability 0.82

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BFlavin-dependent tryptophan halogenase rebh (EC 1.14.14.7)protein52739% helix, 20% strandQ8KHZ8

Ligands and binding sites

  • PO4 · Phosphate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
110320.820.83118empty
27540.770.8164PO4
37160.760.8173PO4
42910.600.7832empty
52620.550.7729empty

Interfaces

1 interface between chains.

  • A–B · 1737 Ų buried · 11 hydrogen bonds · protein-protein

Compared structures

  • 4LU6 · Thermostabilized RebH · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8KHZ8 · AlphaFold monomer V2.0 prediction for flavin-dependent tryptophan halogenase rebh (Q8KHZ8) · a predicted model of the same protein · chain A against A, TM-score 0.99

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