MolNFT v1 · #9868 · protein
Carbonic anhydrase II (F131V) complexed with 4-(aminosulfonyl)-N-[(2, 3,4-TRIFLUOROPHENYL)METHYL]-benzamide
1I9O: “Carbonic anhydrase II (F131V) complexed with 4-(aminosulfonyl)-N-[(2, 3,4-TRIFLUOROPHENYL)METHYL]-benzamide”. X-ray diffraction, 3 ligands (IOC, ZN, HG), 2 pockets (best druggability 0.59). MolNFT v1 #9868 on GenesisL1: 3D…
- PDB
- 1I9O
- Type
- protein
- Length
- 258 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Carbonic anhydrase II
- EC
- 4.2.1.1
- UniProt
- P00918
- Ligands
- IOC, ZN, HG
- Pockets
- 2 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbonic anhydrase II (EC 4.2.1.1) | protein | 258 | 15% helix, 30% strand | P00918 |
Ligands and binding sites
- IOC · 4-(aminosulfonyl)-N-[(2,3,4-trifluorophenyl)methyl]-benzamide · ligand · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
- HG · Mercury (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 219 | 0.59 | 0.80 | 31 | ZN, IOC |
| 2 | 53 | 0.29 | 0.75 | 13 | empty |
Compared structures
- 1I9O · Carbonic anhydrase II (F131V) complexed with 4-(aminosulfonyl)-N-[(2,3,4-TRIFLUOROPHENYL)M… · the same entry in another collection · chain A against A, TM-score 1.00
- P00918 · AlphaFold monomer V2.0 prediction for carbonic anhydrase 2 (P00918) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00918
- Elsewhere: RCSB PDB 1I9O · PDBe 1I9O · UniProt P00918
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