MolNFT v1 · #98572 · protein

Crystal structure of DOC2B C2B domain

4LDC · Double C2-like domain-containing protein beta: “Crystal structure of DOC2B C2B domain”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #98572 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4LDC
Type: protein
Length: 149 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Double C2-like domain-containing protein beta
UniProt: P70610
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Double C2-like domain-containing protein beta	protein	149	12% helix, 44% strand	P70610

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A
FLC · Citrate anion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4LDC · Crystal Structure of DOC2B C2B domain · the same entry in another collection · chain A against A, TM-score 1.00
P70610 · AlphaFold monomer V2.0 prediction for double C2-like domain- containing protein beta… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P70610
Elsewhere: RCSB PDB 4LDC · PDBe 4LDC · UniProt P70610

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