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MolNFT v1 · #96298 · protein

Crystal structure of the N-terminal, growth factor-like domain of the amyloid precursor protein bound to copper

4JFN · Amyloid beta A4 protein: “Crystal structure of the N-terminal, growth factor-like domain of the amyloid precursor protein bound to…”. X-ray diffraction, 1 ligand (CU). MolNFT v1 #96298 on GenesisL1: 3D structure, binding sites and…

PDB
4JFN
Type
protein
Length
101 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Amyloid beta A4 protein
UniProt
P05067
Ligands
CU

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAmyloid beta A4 proteinprotein10111% helix, 28% strandP05067

Ligands and binding sites

  • CU · Copper (II) ion · metal · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 4JFN · Crystal structure of the N-terminal, growth factor-like domain of the amyloid precursor… · the same entry in another collection · chain A against A, TM-score 1.00
  • P05067 · AlphaFold monomer V2.0 prediction for amyloid-beta precursor protein (P05067) · a predicted model of the same protein · chain A against A, TM-score 0.89

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