MolNFT v1 · #95132 · protein
Crystal structure of rice DWARF14 (D14)
4IH9 · Dwarf 88 esterase: “Crystal structure of rice DWARF14 (D14)”. X-ray diffraction, 4 pockets (best druggability 0.69). MolNFT v1 #95132 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4IH9
- Type
- protein
- Length
- 530 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dwarf 88 esterase
- UniProt
- Q10QA5
- Pockets
- 4 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Dwarf 88 esterase | protein | 265 | 45% helix, 15% strand | Q10QA5 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 135 | 0.69 | 0.89 | 23 | empty |
| 2 | 171 | 0.68 | 0.86 | 22 | empty |
| 3 | 163 | 0.43 | 0.75 | 22 | empty |
| 4 | 110 | 0.42 | 0.77 | 27 | empty |
Interfaces
1 interface between chains.
- A–B · 659 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q10QA5
- Elsewhere: RCSB PDB 4IH9 · PDBe 4IH9 · UniProt Q10QA5
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