GL1X · GenesisL1 explorer

MolNFT v1 · #9498 · protein

Solution structure of the EEA1 fyve domain complexed with inositol 1, 3-bisphosphate

1HYI · Endosome-associated protein: “Solution structure of the EEA1 fyve domain complexed with inositol 1, 3-bisphosphate”. Solution nmr, 2 ligands (ITP, ZN). MolNFT v1 #9498 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1HYI
Type
protein
Length
65 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Endosome-associated protein
UniProt
Q15075
Ligands
ITP, ZN

Structure

solution nmr · 1 distinct chain · 11% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEndosome-associated proteinprotein6511% helix, 25% strandQ15075

Ligands and binding sites

  • ITP · Phosphoric acid mono-(2,3,4,6-tetrahydroxy-5-phosphonooxy-cyclohexyl) ester · ligand · chains A
  • ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1HYI · Solution structure of the EEA1 fyve domain complexed with inositol 1,3-bisphosphate · the same entry in another collection · chain A against A, TM-score 1.00
  • Q15075 · AlphaFold monomer V2.0 prediction for early endosome antigen 1 (Q15075) · a predicted model of the same protein · chain A against A, TM-score 0.74

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